Best Cloud-Based Warehouse Management Systems for Ecommerce in 2026: Our Top 5

Choosing the right cloud based warehouse management system really can make a huge difference to how your ecommerce business handles stock, fulfillment and growth.

I've been working with ecommerce companies for over 12 years now and have tested out a whole lot of warehouse tools.

Some of them are super simple and lightweight, while others are built with large operations in mind. Based on ease of use, clean workflow and value for money, here are the best cloud WMS platforms for 2025.

Our Top 5 Picks for Cloud-Based WMS PlatformBest ForStarting PriceFree TrialKey FeatureShipHeroFast-growing ecommerce brandsFrom $1,995/moNoBuilt-in shipping and barcode scanningSkuVaultStock accuracyFrom $449/moYesSolid multichannel stock controlExtensiv3PL workflowsCustom pricingNoMulti-site routingNetSuiteLarge, multi-channel brandsCustom pricingNoDeep automationLogiwaSmart warehouse automationFrom $2,500/moYesAI-backed picking

All of these systems offer cloud access, speed and accurate tracking across stock and orders.

What really sets them apart is how big your operation is and how complicated your fulfillment setup is.

Go to the top 1. ShipHero: Best for Fast-Growing Ecommerce Brands

Starting price: $1,995 per month (no free trial)

If your order volume is shooting up fast, then ShipHero is a strong contender. It’s designed with ecommerce in mind and integrates nicely with Shopify, BigCommerce and Amazon.

Pros

Native ecommerce integrations which make life a lot easier Built-in label creation and barcode tools A great option for those wanting a single system for receiving, picking, packing and shipping

Cons

Price can be a bit steep for small teams Reports could be a bit more detailed

ShipHero is also great for helping brands make the move from manual workflows thanks to its clear layout and mobile tools.

It’s a strong match for brands wanting a single system that can handle receiving, picking, packing and shipping without needing any extra plugins.

Go to the top 2. SkuVault: Best for Stock Accuracy

Starting price: From $449 per month – yes to a free trial

SkuVault is ideal for ecommerce teams who are really focused on stock accuracy. If oversells or missing items are causing problems in your warehouse, then this platform can help sort it out quickly.

Pros

Real-time stock syncing Barcode tools Works with Amazon, eBay, Shopify, Walmart and more Easy to get the hang of

Cons

Design looks a bit dated Shipping tools are a bit limited

SkuVault is a great fit for growing teams who want clean stock numbers without having to take on a massive system.

It’s a good match for brands moving beyond basic tools but not yet ready for heavy enterprise software.

Go to the top 3. Extensiv (formerly 3PL Central): Best for Outsourced Fulfillment

Starting price: Custom pricing – no free trial

Extensiv’s strength is clear: it connects in-house teams with 3PL partners. If you use outside fulfillment or split stock across more than one site, Extensiv gives you the control you need.

Pros

Multi-site routing Stock control across warehouses 3PL integrations which make billing and client dashboards a lot easier Grows with your volume

Cons

Takes time to get to grips with Setup can be a bit slower

This platform has some really strong tools for shared stock, billing and client dashboards.

It gives ecommerce brands better oversight when working with external partners, which can be hard to achieve without a custom build.

Go to the top 4. NetSuite WMS: Best for Enterprise Ecommerce Brands

Starting price: Custom pricing (often $10,000+ upfront) – no free trial

NetSuite WMS is a full-scale solution for large operations. When paired with the full NetSuite environment, it connects inventory, finance, purchasing and warehouse tasks in one place.

Pros

Strong backend control Solid for multi-site operations Deep data tools which can really help with decision making Supports complex workflows

Cons

Setup takes a long time Needs training and admin to make the most of it

NetSuite WMS works best for brands running large catalogs and multi-country shipping.

If you already rely on NetSuite for accounting or ERP tasks, the WMS extension ties everything together really smoothly.

Go to the top 5. Logiwa: Best for Smart Warehouse Automation

Starting price: From $2,500 per month – yes to a free trial

Logiwa offers automation and AI-backed tools for fast-moving ecommerce operations. It’s geared toward teams who want to shorten pick times and reduce steps in the warehouse.

Pros

AI picking which can really speed up order fulfillment Cloud native which means its always up to date Strong batch control Ideal for high volume

Cons

Not a lot of customisation options Smaller adoption among new teams

Logiwa is a really good fit for fast-moving ecommerce operations who want to make the most of automation and AI to speed up order fulfillment and reduce errors.

It helps to eliminate manual decisions, making it easier for fulfillment teams to work to a higher standard.

Go to the top What is a Cloud-Based WMS?

A cloud WMS system lets you track your stock online, directs warehouse tasks and supports order fulfillment, all from your browser or mobile app.

Access your system from anywhere on your device\ Stock levels update in real time\ No need for servers or hardware

Cloud WMS systems also often integrate with ecommerce platforms and shipping companies so everything stays in sync.

This set up is ideal for teams working from different locations, and with the lower upfront costs it's easier for companies that are growing to get started early.

Go to the top Key Features to Look For FeatureWhy It MattersReal-time stock updatesStops oversells and empty shelvesBarcode toolsCuts pick and pack errorsOrder routingSends orders to the right siteReturns toolsControls return flowPlatform integrationsSyncs with Shopify, Amazon, BigCommerce, etc.Carrier linksCreates labels and tracks ordersMulti-site supportHelps with growthReports and insightsImproves staffing and stock planning

You'll want to check which tasks come out-of-the-box and which need custom set up. The less work you need to do the better, the faster you'll be able to get your team up to speed and improve order accuracy and speed.

Go to the top How Much Do Cloud WMS Platforms Cost? WMS PlatformStarting Price (USD)TypeShipHeroFrom $1,995/monthSaaSSkuVaultFrom $449/monthSaaSExtensivCustom pricingSaaS/EnterpriseNetSuite WMSCustom (often $10K+)ERPLogiwaFrom $2,500/monthSaaS

Most plans charge by order count or user seats, some include onboarding fees, especially for enterprise solutions.

Prices can vary, from $500 to $2,500 per month for mid-range tools, while enterprise systems can be a whole lot more. Don't forget to factor in support and training when you're comparing prices.

Go to the top Key Stats on Warehouse Management in Ecommerce 80% of warehouses will have moved to cloud WMS by 2026 Market size is on track to reach $4.2 billion by 2028 Barcode workflows can cut pick errors by as much as 67% Returns automation can cut handling time by up to 50% AI routing can speed up pick times by 25% ShipHero clients on Shopify see 40% faster order fulfillment

Numbers like these show how much of a difference good stock control and order speed can make to ecommmerce growth. Companies that get WMS tools early often get clearer data and fewer costly errors.

Go to the top How to choose the right cloud WMS Business NeedWMS Feature RequiredRising order volumeBarcode tools and automationSelling on many channelsMultichannel stock syncMore than one warehouseOrder routing and multi-site supportHigh returnsReturns workflowsDeep forecastingStrong reports and insights

You don't need all of the features right now, but it's good to know that your WMS system will be able to expand with your business. If it can't then it's likely to hold you back.

Go to the top Final Thoughts

Before you get a cloud WMS system, think about where your business is at right now and what you need from it.

Make sure it can grow with you and that it has all of the features you'll need as you expand.

My pick would be:

ShipHero for Shopify or BigCommerce brands that are growing fast SkuVault if stock accuracy is your biggest issue right now Extensiv if you partner with 3PLs NetSuite if you run a big operation with ERP needs Logiwa for fast automation and a high number of SKUs

Your warehouse should be working for you, not holding you back.

A cloud WMS system lets you work faster, more accurately and keep your customers happy as your business grows.

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